Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926515.1_cds_XP_016474529.1_66545
CDS Infomation

[gene=LOC107796286] [db_xref=GeneID:107796286] [protein=protein PHYTOCHROME KINASE SUBSTRATE 4-like] [protein_id=XP_016474529.1] [location=44831..46384] [gbkey=CDS]
Sequence

ATGGACTCCCCAACAACAGTTAAAACCTTAAAATACAAATCCTCTCAGAACCCTGCTAAT
CTTGTTATAGCAGAAAGTCCTATGAAGTACAGATCCTTTGTCCAAAACCATATCCTAAAA
GATGCATCTTTCTCCTCTTATCTCAAACCAGAAGAACATATCTCCGAAGATTCCGAAATA
AACGTGTTTGATGCAAAAAAATATTTCAGTGAAAGCAATGATTCCCCTCCAGAAACCCAA
AAGAACTTAGCAGATCAATCCGAATTAGCTTCAGTTCCTCGAGTTTCGTCAGTTTCTTCC
GTAGATAATGGCTACGGAAGAAACTTTCGTGCCAATTCTTTTCGTGCTACTCCAACTGCT
TCATCTGAAGCGAGTTGGAATAGCCAAACTGGCTTACTATCAAATCCTCCAGGAGCTATT
GCAGTTTCATTGAGAAATACTCCTAATGAAAAACACAGAGGCTCTTTTAGTACTCGTAAA
TGGTTTTTCTGCCGAAAATGTCCTTGCTCAGGGAAGAAATCGGTACAAGTTGAGGAAACT
AACTCGGAGCCTAGAACGGAAACTGGGACGGAAAATTTTGCTGTCAAACACACTCAGAGG
GTACTTGAAAAAGCTACCAACACGTCTCAGAAAAGTTCGACTGAAATACAACAGAGAGCA
GCAATTCTAAACTCAAACGGACATCCTCAGAGGCCGCAGCTGTCACAGGCCCATATCGCT
CCTTTAGAGTCAATAAATAAAATTGGAACCATACAGAGAAGATCATTAGAGTCAGAGACT
CATGTAACGCCTAGCACAATTGCATGTCAACAGCGCGTGTTGGCATCAGTTAGGCCGTTT
ACTGAAACTGCCGGGGGATTTTCATTCCCAATCTTGAACCAATCAACACAAGCTAAATTC
GGAATCAAACCTCCACCAACAAGGTCCATTTCCCCAATATTAGAAGAACCGGCCCGAGAT
TCACTAGAAGTTTTTCAACCATCTTCAAGAAAATCAACAGAATGCAATTTCCCGTTCCCA
GGAAGCCCGATTTCGCGCGTGACAGCAACAGACGATGACGTTGCCAGTGACGCAAGCTCC
GATTTGTTTGAAATCGAGAGCTTTTCTACTTCGATAGCAACTTCTTGTCCTATGTACCGT
CAACGAAATTCACTCGACGAACCAGCTACCCCGAGCATTGCAGCTACAGAGTGTTACGCA
CCTAGCGAAGTTAGTATCGATTGGAGTGTTACTACAGCTGAAGGTTTCGACCGTGCTAGT
ATTACTAATTATTCCTCTATCTCTGAAATTGACAACGTGGCGAATATGAGACTTTTCAGT
GGCGGCGGCGGCGACGGAGGAAAGTGGAAGGGGAGTGGATTGTTGAGTTGTCGGCATGAG
AAAGCGGTAAATGTCGGACCAAAACCGGTGAAATTTGTATCGGCCGAGGGTCCACCGTTG
CCATTAATATCTGCGGCAGGACATGTGAGTAGTAGGCCAGTGGCCAGAGCTAATAATAAG
CCACCCATTGCTACCTCTCATTCTGCACGCTTATCTCTTGCCTTTGCAGCATGA

Peptide Sequence

PEP ID

XP_016474529.1
PEP Infomation

PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4-like [Nicotiana tabacum]
Sequence

MDSPTTVKTLKYKSSQNPANLVIAESPMKYRSFVQNHILKDASFSSYLKPEEHISEDSEI
NVFDAKKYFSESNDSPPETQKNLADQSELASVPRVSSVSSVDNGYGRNFRANSFRATPTA
SSEASWNSQTGLLSNPPGAIAVSLRNTPNEKHRGSFSTRKWFFCRKCPCSGKKSVQVEET
NSEPRTETGTENFAVKHTQRVLEKATNTSQKSSTEIQQRAAILNSNGHPQRPQLSQAHIA
PLESINKIGTIQRRSLESETHVTPSTIACQQRVLASVRPFTETAGGFSFPILNQSTQAKF
GIKPPPTRSISPILEEPARDSLEVFQPSSRKSTECNFPFPGSPISRVTATDDDVASDASS
DLFEIESFSTSIATSCPMYRQRNSLDEPATPSIAATECYAPSEVSIDWSVTTAEGFDRAS
ITNYSSISEIDNVANMRLFSGGGGDGGKWKGSGLLSCRHEKAVNVGPKPVKFVSAEGPPL
PLISAAGHVSSRPVARANNKPPIATSHSARLSLAFAA

Transcript Sequence

Gene sequence data has not been registered.